These 30 commits are when the Protocol Buffers files have changed:
| Commit: | 07faaa6 | |
|---|---|---|
| Author: | Cheng Ye | |
fs distributed working
The documentation is generated from this commit.
| Commit: | e9b7eff | |
|---|---|---|
| Author: | Cheng Ye | |
still have issues with retry rate
| Commit: | 4a0ad68 | |
|---|---|---|
| Author: | Cheng Ye | |
\temp
| Commit: | 6e05ec6 | |
|---|---|---|
| Author: | Cheng Ye | |
init
| Commit: | 74c2abd | |
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| Author: | Cheng Ye | |
skip unchanged dir init
| Commit: | be5bbce | |
|---|---|---|
| Author: | Cheng Ye | |
Merge branch 'master' of https://github.com/yatisht/usher into MPI
| Commit: | 3b628c8 | |
|---|---|---|
| Author: | Cheng Ye | |
parallelized loader
| Commit: | 88c8c93 | |
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| Author: | Alex Kramer | |
update taxodium proto to include new meta field
| Commit: | c26011c | |
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| Author: | Alex Kramer | |
update taxodium proto (include title and description)
| Commit: | 05e335f | |
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| Author: | Alex Kramer | |
format taxodium.proto
| Commit: | dc9d4ef | |
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| Author: | Alex Kramer | |
add stuff
| Commit: | 7bb3e8c | |
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| Author: | Alex Kramer | |
begin extract function to write taxodium-formatted pb
| Commit: | 75e3a43 | |
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| Author: | Yatish Turakhia | |
Fixed line endings.
| Commit: | 56e4ad4 | |
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| Author: | Theo Sanderson | |
| Committer: | GitHub | |
Proto comments: clarify that the type of traversal is preorder
| Commit: | bfeffa4 | |
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| Author: | Theo Sanderson | |
| Committer: | GitHub | |
Update parsimony.proto
| Commit: | dac615e | |
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| Author: | Theo Sanderson | |
| Committer: | GitHub | |
Document parsimony.proto
| Commit: | cb958d2 | |
|---|---|---|
| Author: | Cheng Ye | |
| Committer: | Cheng Ye | |
documentation
| Commit: | 3552784 | |
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| Author: | Cheng Ye | |
temp
| Commit: | 2512765 | |
|---|---|---|
| Author: | Cheng Ye | |
rebuild
| Commit: | 23b1a19 | |
|---|---|---|
| Author: | Cheng | |
protobuf
| Commit: | 51cfa3e | |
|---|---|---|
| Author: | Cheng Ye | |
| Committer: | Cheng Ye | |
temp
| Commit: | 3b583a2 | |
|---|---|---|
| Author: | Cheng Ye | |
tree rearrangement
| Commit: | e9f7f0c | |
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| Author: | Yatish Turakhia | |
Rename annotations->clade_annotations and annotations.txt to clades.txt
| Commit: | f0b5aaf | |
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| Author: | Yatish Turakhia | |
Store a vector of node annotations.
| Commit: | f2335fc | |
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| Author: | Yatish Turakhia | |
Removing epp and other fields from protobuf.
| Commit: | e781008 | |
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| Author: | Jakob | |
Adding attribute and read/write lines to support neighborhood size metadata
| Commit: | 655971d | |
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| Author: | Yatish Turakhia | |
Preliminary version of clade assignment
| Commit: | e5e39e7 | |
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| Author: | Jakob | |
Adding global parsimony tracking to protobuf
| Commit: | 5c3eef5 | |
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| Author: | Jakob | |
Adding protobuf structure and read/write for EPPs metadata values
| Commit: | 84838d8 | |
|---|---|---|
| Author: | Yatish Turakhia | |
Initial working version.