Proto commits in bayesmix-dev/bayesmix

These commits are when the Protocol Buffers files have changed: (only the last 100 relevant commits are shown)

Commit:1cf5f57
Author:Mario beraha

adding docs

Commit:dc9ccee
Author:TeoGiane

Fix missing protobuf messages for BetaGG hierarchy

Commit:39b22d4
Author:Mario beraha

Merge branch 'slice' of github.com:bayesmix-dev/bayesmix into dp_squared

Commit:669930b
Author:Mario beraha

using truncsb also for infinite mixtures

The documentation is generated from this commit.

Commit:7201b97
Author:Mario beraha

beta gamma gamma hierarchy and related test

Commit:6259be5
Author:Mario beraha

Gamma-Gamma prior and associated test

Commit:f7a7087
Author:Mario beraha

beta likelihood and associated tests

Commit:586cc98
Author:Mario beraha

added PrivateNeal2

Commit:f0871df
Author:Mario beraha

caching cholesky factor

Commit:be33961
Author:taguhiM

refactored naming

Commit:1a5beee
Author:taguhiM

renamed proto ids for mixing and hierarchy

Commit:489b734
Author:taguhiM

fixed merge conflicts

Commit:fcf3df9
Author:EnricoPaglia

Modifying mixing state for pybmix python hierarchy

Commit:520de3f
Author:EnricoPaglia

Typo

Commit:8fff112
Author:EnricoPaglia

Proto files for python mixing in Pybmix

Commit:8528563
Author:taguhiM

added id for python non-conjugate

Commit:7795f5e
Author:Mario beraha

make gammagamma great again

Commit:fe8a243
Author:EnricoPaglia

Change of rng and added proto file for python hierarchy

Commit:87963a8
Author:Matteo Gianella

Changed fake_prior field (NEEDS APPROVAL)

Commit:f8afa69
Author:Matteo Gianella

Cleaned code

Commit:8d023ae
Author:Matteo Gianella

Add HierarchyId::FA

Commit:fb7de86
Author:Matteo Gianella

Revert changes

Commit:999ae01
Author:Matteo Gianella

Add FAPriorModel (ONGOING)

Commit:4f1d86c
Author:Matteo Gianella

Uncomment FAState

Commit:9ed4e99
Author:Matteo Gianella

Add LapNIG hierarchy id

Commit:167bde5
Author:Matteo Gianella

Silenced hierarchies not yet re-factored

Commit:f191ba1
Author:Matteo Gianella

Merge branch 'master' of https://github.com/bayesmix-dev/bayesmix into bayesmix-dev-master

Commit:9154d45
Author:Mario beraha

spring cleanup

Commit:e737497
Author:AleCarminati
Committer:Mario Beraha

Minor fix on parameter input

Commit:45613c4
Author:AleCarminati
Committer:Mario Beraha

Parameters of the algorithm are now read from proto

Commit:9cb0d78
Author:Bruno Guindani
Committer:GitHub

Merge pull request #101 from giacomodecarlo/master MFA Hierarchy

Commit:b7ad690
Author:taguhiM

added descriptions in proto messages for mfm

Commit:10c1b8d
Author:Giacomo De Carlo

New FA name + folder

Commit:d1bfb0d
Author:taguhiM

fixed conflict and merge

Commit:eedb982
Author:Giovanni Battista Pollam

Added gamma and lambda as proto messages

Commit:c446c78
Author:passcar99

Merge changes in bayesmix-dev

Commit:3c5f546
Author:Enrico

New mixing first implementation

Commit:3fd7237
Author:passcar99

Review commit

Commit:24e5a73
Author:taguhiM

fixes following brunoguindani's review

Commit:16e308b
Author:Giacomo De Carlo

General Optimization

Commit:4e6db87
Author:Enrico

Changes suggested in the review of the PR by mberaha + changes in public/private

Commit:58f4b2d
Author:taguhiM

resolved conflicts

Commit:a2d5382
Author:Enrico

fixed mistakes and cleaned the code, ready for PR

Commit:11d37f7
Author:Enrico

adding LapNIG Prior and fixed_values prior

Commit:12cf3c0
Author:passcar99

rename variables and add psi_inverse to remove unnecessary computation

Commit:b17802a
Author:Matteo Gianella

Update proto files related to NNxIG hierarchy

Commit:237f140
Author:Enrico

implementation of LapNIG excluding sample_full_cond

Commit:6e4295a
Author:Giacomo De Carlo

algorithm state proto mfa

Commit:c3507e4
Author:Giacomo De Carlo

Nome MFAPriorDistribution in altro file proto

Commit:697c87e
Author:giacomodecarlo
Committer:GitHub

MFAPriorDistribution può andare in distribution.proto?

Commit:a10c365
Author:passcar99

hook modification

Commit:1f2fce6
Author:passcar99

hook modifications

Commit:eeb01df
Author:passcar99

hook formatting

Commit:daa4bc0
Author:giacomodecarlo
Committer:GitHub

MFA Hierarchy id proto

Commit:22002cf
Author:giacomodecarlo

added mfa hierarchy in hierarchy_prior.proto

Commit:5f963b2
Author:giacomodecarlo

Recreated fork and added mfa hierarchy .h and .cc files, modified proto files for new hierarchy

Commit:bc919cd
Author:brunoguindani

Last small corrections

Commit:902d73a
Author:Mario beraha

added remark

Commit:a63c198
Author:Mario beraha

Merge branch 'document_protos' of github.com:bayesmix-dev/bayesmix into document_protos

Commit:13d0dcd
Author:Mario beraha

minor changes

Commit:47f3dd6
Author:Mario Beraha
Committer:GitHub

Update proto/mixing_prior.proto Co-authored-by: Bruno Guindani <48137407+brunoguindani@users.noreply.github.com>

Commit:235eb3c
Author:Mario Beraha
Committer:GitHub

Update proto/mixing_id.proto Co-authored-by: Bruno Guindani <48137407+brunoguindani@users.noreply.github.com>

Commit:39450f8
Author:Mario Beraha
Committer:GitHub

Update proto/ls_state.proto Co-authored-by: Bruno Guindani <48137407+brunoguindani@users.noreply.github.com>

Commit:25a6c54
Author:Mario Beraha
Committer:GitHub

Update proto/ls_state.proto Co-authored-by: Bruno Guindani <48137407+brunoguindani@users.noreply.github.com>

Commit:7105e1d
Author:Mario Beraha
Committer:GitHub

Update proto/distribution.proto Co-authored-by: Bruno Guindani <48137407+brunoguindani@users.noreply.github.com>

Commit:1235f72
Author:Mario Beraha
Committer:GitHub

Update proto/algorithm_state.proto Co-authored-by: Bruno Guindani <48137407+brunoguindani@users.noreply.github.com>

Commit:b4e6408
Author:Mario beraha

small revert

Commit:c536002
Author:Mario beraha

fixed tests

Commit:18d9e29
Author:Mario beraha

documented all protos

Commit:68516d7
Author:Mario beraha

documenting protos

Commit:6b33dec
Author:brunoguindani

Seriously?

Commit:fb61f0f
Author:brunoguindani

Reverting

Commit:d8d1d02
Author:brunoguindani

Whoops

Commit:0d3e325
Author:brunoguindani

Quick changes

Commit:4259390
Author:Mario beraha

removed commented lines

Commit:7b8e234
Author:Mario beraha

writing and loading hypers from proto in nnig hierarchy

Commit:0142245
Author:Mario beraha

makingitwork

Commit:2669cad
Author:mberaha

showing some significant speedups

Commit:04f70be
Author:brunoguindani

More changes to TruncSB

Commit:1550d68
Author:brunoguindani

Misc. changes to TruncSB

Commit:623cd02
Author:brunoguindani

Added truncated sitckbreak mixing

Commit:e6ee08c
Author:brunoguindani

MarginalState proto -> AlgorithmState

Commit:cad558b
Author:brunoguindani

Setting up algorithm settings proto

Commit:39cc669
Author:brunoguindani

First draft for algorithm settings

Commit:a474f41
Author:brunoguindani

Changed to full_cond_lpdf() member

Commit:4b8d52c
Author:brunoguindani

num_clusters -> num_components in LogSB

Commit:d10caf9
Author:brunoguindani

Moved cluster initialization to prior proto

Commit:2169e89
Author:brunoguindani

Removed separate proposal_var parameter

Commit:abc2dc7
Author:brunoguindani
Committer:brunoguindani

We can put tau and eta in the prior!!!!!

Commit:087f6bb
Author:brunoguindani

Fixed LogSB prior

Commit:cdee6dd
Author:brunoguindani

Mixing::initialize() -> initialize(n_clust)

Commit:74255b4
Author:brunoguindani

R/W proto methods for LogitSB

Commit:6808a49
Author:brunoguindani

First easy methods for LogitSB

Commit:43c01eb
Author:brunoguindani

First skeleton for Logit StickBreak Mixing

Commit:4dfeecc
Author:mberaha

added -id suffix to all enums

Commit:67b5f8b
Author:mberaha

reverted to old naming

Commit:bf2a23f
Author:mberaha

improved factory documentation

Commit:f962d12
Author:mberaha

mixing enum proto

Commit:2e6dda1
Author:mberaha

hierarchy enum in factory

Commit:72f50f9
Author:mberaha

hierarchy enum in factory